Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.03□□□□□ -0.48
Cldn18P56857 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.03□□□□□ -0.48
Cldn18P56857 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldn18P56857 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn18P56857 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Cldn18P56857 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn18P56857 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Cldn18P56857 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn18P56857 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.02□□□□□ -0.49
Cldn18P56857 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.02□□□□□ -0.49
Cldn18P56857 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.02□□□□□ -0.49
Cldn18P56857 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.02□□□□□ -0.49
Cldn18P56857 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn18P56857 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cldn18P56857 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldn18P56857 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn18P56857 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.02□□□□□ -0.49
Cldn18P56857 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldn18P56857 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn18P56857 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.01□□□□□ -0.49
Cldn18P56857 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldn18P56857 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.01□□□□□ -0.49
Cldn18P56857 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldn18P56857 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.01□□□□□ -0.49
Cldn18P56857 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.01□□□□□ -0.49
Cldn18P56857 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cldn18P56857 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Cldn18P56857 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn18P56857 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldn18P56857 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cldn18P56857 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cldn18P56857 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cldn18P56857 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12□□□□□ -0.49
Cldn18P56857 Gm5687-201ENSMUST00000118252 640 ntBASIC12□□□□□ -0.49
Cldn18P56857 Gm12960-201ENSMUST00000120017 1066 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms