Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NcanP55066 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.03□□□□□ -0.16
NcanP55066 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.03□□□□□ -0.16
NcanP55066 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NcanP55066 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NcanP55066 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.03□□□□□ -0.16
NcanP55066 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NcanP55066 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.03□□□□□ -0.16
NcanP55066 Gm6458-201ENSMUST00000211573 635 ntBASIC14.03□□□□□ -0.16
NcanP55066 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.03□□□□□ -0.16
NcanP55066 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NcanP55066 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.03□□□□□ -0.16
NcanP55066 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.03□□□□□ -0.16
NcanP55066 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NcanP55066 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NcanP55066 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NcanP55066 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.02□□□□□ -0.16
NcanP55066 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NcanP55066 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.02□□□□□ -0.17
NcanP55066 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.02□□□□□ -0.17
NcanP55066 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Gm11978-201ENSMUST00000122315 466 ntBASIC14.02□□□□□ -0.17
NcanP55066 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.02□□□□□ -0.17
NcanP55066 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.02□□□□□ -0.17
NcanP55066 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NcanP55066 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.02□□□□□ -0.17
NcanP55066 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.02□□□□□ -0.17
NcanP55066 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NcanP55066 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NcanP55066 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NcanP55066 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
NcanP55066 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.01□□□□□ -0.17
NcanP55066 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NcanP55066 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NcanP55066 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.01□□□□□ -0.17
NcanP55066 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms