Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm24255-201ENSMUST00000104481 128 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Gm10156-201ENSMUST00000122364 462 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Gm4271-201ENSMUST00000174444 973 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.33□□□□□ -0.28
Atxn1P54254 Gm10608-202ENSMUST00000213924 676 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atxn1P54254 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.33□□□□□ -0.28
Atxn1P54254 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atxn1P54254 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atxn1P54254 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Atxn1P54254 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Atxn1P54254 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm8213-201ENSMUST00000118191 441 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm6152-201ENSMUST00000151704 340 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm2991-201ENSMUST00000173338 480 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm3222-201ENSMUST00000071282 990 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.32□□□□□ -0.28
Atxn1P54254 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Atxn1P54254 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atxn1P54254 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.31□□□□□ -0.28
Atxn1P54254 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.31□□□□□ -0.28
Atxn1P54254 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Atxn1P54254 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Atxn1P54254 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Atxn1P54254 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.31□□□□□ -0.28
Atxn1P54254 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.31□□□□□ -0.28
Atxn1P54254 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.31□□□□□ -0.28
Atxn1P54254 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.31□□□□□ -0.28
Atxn1P54254 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Gm27772-201ENSMUST00000184900 187 ntBASIC13.31□□□□□ -0.28
Atxn1P54254 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.31□□□□□ -0.28
Atxn1P54254 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.31□□□□□ -0.28
Atxn1P54254 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.31□□□□□ -0.28
Atxn1P54254 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atxn1P54254 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms