Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.78□□□□□ -0.04
Brca1P48754 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Brca1P48754 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Gm10051-201ENSMUST00000145209 414 ntBASIC14.78□□□□□ -0.04
Brca1P48754 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.78□□□□□ -0.04
Brca1P48754 Gm39404-201ENSMUST00000216350 313 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Brca1P48754 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.77□□□□□ -0.04
Brca1P48754 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Brca1P48754 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.77□□□□□ -0.04
Brca1P48754 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.77□□□□□ -0.04
Brca1P48754 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Brca1P48754 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Brca1P48754 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Brca1P48754 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Brca1P48754 Gm13408-201ENSMUST00000119822 798 ntBASIC14.77□□□□□ -0.05
Brca1P48754 Gm13935-201ENSMUST00000121859 798 ntBASIC14.77□□□□□ -0.05
Brca1P48754 Gm9211-201ENSMUST00000182882 975 ntBASIC14.77□□□□□ -0.05
Brca1P48754 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.77□□□□□ -0.05
Brca1P48754 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.77□□□□□ -0.05
Brca1P48754 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Brca1P48754 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Brca1P48754 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.77□□□□□ -0.05
Brca1P48754 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.76□□□□□ -0.05
Brca1P48754 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.76□□□□□ -0.05
Brca1P48754 Gm6407-201ENSMUST00000176468 549 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.76□□□□□ -0.05
Brca1P48754 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.76□□□□□ -0.05
Brca1P48754 Spcs1-203ENSMUST00000226374 592 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Brca1P48754 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Brca1P48754 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Brca1P48754 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.76□□□□□ -0.05
Brca1P48754 Gm11597-201ENSMUST00000121423 964 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.76□□□□□ -0.05
Brca1P48754 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Brca1P48754 Gm17040-202ENSMUST00000170597 889 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm8018-201ENSMUST00000173536 789 ntBASIC14.76□□□□□ -0.05
Brca1P48754 Gm19459-201ENSMUST00000176240 835 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms