Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox2P48432 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox2P48432 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Gm12428-201ENSMUST00000119844 727 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox2P48432 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox2P48432 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Gm27494-201ENSMUST00000184735 189 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox2P48432 Gm33320-201ENSMUST00000192232 530 ntBASIC12.57□□□□□ -0.4
Sox2P48432 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sox2P48432 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox2P48432 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox2P48432 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Sox2P48432 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox2P48432 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Gm11779-201ENSMUST00000118541 368 ntBASIC12.56□□□□□ -0.4
Sox2P48432 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.56□□□□□ -0.4
Sox2P48432 Gm15467-201ENSMUST00000120582 445 ntBASIC12.56□□□□□ -0.4
Sox2P48432 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Gm8927-201ENSMUST00000181978 981 ntBASIC12.56□□□□□ -0.4
Sox2P48432 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox2P48432 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.56□□□□□ -0.4
Sox2P48432 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox2P48432 Gm3222-201ENSMUST00000071282 990 ntBASIC12.56□□□□□ -0.4
Sox2P48432 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox2P48432 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox2P48432 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms