Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.32□□□□□ -0.44
Nkx2-2P42586 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm6983-201ENSMUST00000214912 628 ntBASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.31□□□□□ -0.44
Nkx2-2P42586 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Gm44397-201ENSMUST00000195950 113 ntBASIC12.31□□□□□ -0.44
Nkx2-2P42586 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.31□□□□□ -0.44
Nkx2-2P42586 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.31□□□□□ -0.44
Nkx2-2P42586 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-2P42586 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.3□□□□□ -0.44
Nkx2-2P42586 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.3□□□□□ -0.44
Nkx2-2P42586 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.3□□□□□ -0.44
Nkx2-2P42586 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-2P42586 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms