Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Chd1P40201 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Chd1P40201 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC19.7■□□□□ 0.74
Chd1P40201 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC19.7■□□□□ 0.74
Chd1P40201 Gm42937-201ENSMUST00000197360 752 ntBASIC19.7■□□□□ 0.74
Chd1P40201 Gm43520-201ENSMUST00000197996 164 ntBASIC19.7■□□□□ 0.74
Chd1P40201 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC19.7■□□□□ 0.74
Chd1P40201 Gm9785-201ENSMUST00000062642 1006 ntBASIC19.7■□□□□ 0.74
Chd1P40201 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC19.7■□□□□ 0.74
Chd1P40201 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.7■□□□□ 0.74
Chd1P40201 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1P40201 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd1P40201 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Chd1P40201 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.69■□□□□ 0.74
Chd1P40201 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd1P40201 AC130671.2-201ENSMUST00000227224 1621 ntBASIC19.69■□□□□ 0.74
Chd1P40201 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.69■□□□□ 0.74
Chd1P40201 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1P40201 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Chd1P40201 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd1P40201 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chd1P40201 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chd1P40201 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd1P40201 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chd1P40201 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC19.68■□□□□ 0.74
Chd1P40201 Gm22144-201ENSMUST00000157402 102 ntBASIC19.68■□□□□ 0.74
Chd1P40201 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Gm45120-201ENSMUST00000208880 408 ntBASIC19.68■□□□□ 0.74
Chd1P40201 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC19.68■□□□□ 0.74
Chd1P40201 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1P40201 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Gm9387-201ENSMUST00000098624 1320 ntBASIC19.67■□□□□ 0.74
Chd1P40201 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd1P40201 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd1P40201 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Chd1P40201 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd1P40201 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC19.67■□□□□ 0.74
Chd1P40201 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Chd1P40201 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd1P40201 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chd1P40201 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chd1P40201 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC19.66■□□□□ 0.74
Chd1P40201 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC19.66■□□□□ 0.74
Chd1P40201 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chd1P40201 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC19.66■□□□□ 0.74
Chd1P40201 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Gm17831-201ENSMUST00000205579 900 ntBASIC19.66■□□□□ 0.74
Chd1P40201 AC169036.1-201ENSMUST00000227994 296 ntBASIC19.66■□□□□ 0.74
Chd1P40201 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd1P40201 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms