Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm14921-201ENSMUST00000118643 908 ntBASIC17.36■□□□□ 0.37
Col18a1P39061 Gm8199-201ENSMUST00000121323 823 ntBASIC17.36■□□□□ 0.37
Col18a1P39061 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm42937-201ENSMUST00000197360 752 ntBASIC17.36■□□□□ 0.37
Col18a1P39061 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.36■□□□□ 0.37
Col18a1P39061 Gm3028-201ENSMUST00000213805 1119 ntBASIC17.36■□□□□ 0.37
Col18a1P39061 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Col18a1P39061 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col18a1P39061 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm25881-201ENSMUST00000157783 103 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Gm23153-201ENSMUST00000175323 313 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Mir7076-201ENSMUST00000183519 74 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Gm10774-201ENSMUST00000188689 204 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Snora73b-201ENSMUST00000083419 205 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Col18a1P39061 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col18a1P39061 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm10731-201ENSMUST00000181171 448 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC17.35■□□□□ 0.37
Col18a1P39061 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Gm18974-201ENSMUST00000221478 1031 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.35■□□□□ 0.37
Col18a1P39061 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col18a1P39061 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC17.34■□□□□ 0.37
Col18a1P39061 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Col18a1P39061 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Col18a1P39061 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC17.34■□□□□ 0.37
Col18a1P39061 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Col18a1P39061 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col18a1P39061 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.34■□□□□ 0.37
Col18a1P39061 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col18a1P39061 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Col18a1P39061 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Col18a1P39061 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.33■□□□□ 0.37
Col18a1P39061 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.33■□□□□ 0.37
Col18a1P39061 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col18a1P39061 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Col18a1P39061 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.33■□□□□ 0.37
Col18a1P39061 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col18a1P39061 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms