Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HmgclP38060 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.24□□□□□ -0.29
HmgclP38060 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Mir874-201ENSMUST00000104769 76 ntBASIC13.24□□□□□ -0.29
HmgclP38060 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.24□□□□□ -0.29
HmgclP38060 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.24□□□□□ -0.29
HmgclP38060 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.24□□□□□ -0.29
HmgclP38060 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.24□□□□□ -0.29
HmgclP38060 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
HmgclP38060 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
HmgclP38060 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.24□□□□□ -0.29
HmgclP38060 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HmgclP38060 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HmgclP38060 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.23□□□□□ -0.29
HmgclP38060 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.23□□□□□ -0.29
HmgclP38060 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.23□□□□□ -0.29
HmgclP38060 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.23□□□□□ -0.29
HmgclP38060 Gm6983-201ENSMUST00000214912 628 ntBASIC13.23□□□□□ -0.29
HmgclP38060 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
HmgclP38060 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Grk6-205ENSMUST00000224653 2976 ntBASIC13.23□□□□□ -0.29
HmgclP38060 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HmgclP38060 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HmgclP38060 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HmgclP38060 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.22□□□□□ -0.29
HmgclP38060 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HmgclP38060 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.22□□□□□ -0.29
HmgclP38060 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.22□□□□□ -0.29
HmgclP38060 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HmgclP38060 Mir7221-201ENSMUST00000184009 72 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms