Protein–RNA interactions for Protein: P35737

H2-DMb1, Class II histocompatibility antigen, M beta 1 chain, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMb1P35737 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
H2-DMb1P35737 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2-DMb1P35737 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.46□□□□□ -0.73
H2-DMb1P35737 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2-DMb1P35737 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.46□□□□□ -0.73
H2-DMb1P35737 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.46□□□□□ -0.74
H2-DMb1P35737 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.46□□□□□ -0.74
H2-DMb1P35737 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
H2-DMb1P35737 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.45□□□□□ -0.74
H2-DMb1P35737 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2-DMb1P35737 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.44□□□□□ -0.74
H2-DMb1P35737 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.44□□□□□ -0.74
H2-DMb1P35737 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2-DMb1P35737 Gm15460-201ENSMUST00000118147 391 ntBASIC10.44□□□□□ -0.74
H2-DMb1P35737 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.44□□□□□ -0.74
H2-DMb1P35737 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms