Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd28P31041 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.82□□□□□ -0.52
Cd28P31041 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd28P31041 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Gm9727-201ENSMUST00000161387 555 ntBASIC11.82□□□□□ -0.52
Cd28P31041 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.82□□□□□ -0.52
Cd28P31041 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd28P31041 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.82□□□□□ -0.52
Cd28P31041 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd28P31041 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd28P31041 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd28P31041 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd28P31041 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cd28P31041 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cd28P31041 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.81□□□□□ -0.52
Cd28P31041 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Cd28P31041 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cd28P31041 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Gm10819-201ENSMUST00000099988 561 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.81□□□□□ -0.52
Cd28P31041 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.81□□□□□ -0.52
Cd28P31041 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cd28P31041 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.8□□□□□ -0.52
Cd28P31041 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd28P31041 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.8□□□□□ -0.52
Cd28P31041 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Cd28P31041 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd28P31041 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd28P31041 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd28P31041 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd28P31041 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd28P31041 Mir8117-201ENSMUST00000184773 107 ntBASIC11.8□□□□□ -0.52
Cd28P31041 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.8□□□□□ -0.52
Cd28P31041 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms