Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm22121-201ENSMUST00000175148 54 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm6621-201ENSMUST00000193251 772 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm6334-201ENSMUST00000207083 228 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 CT009764.1-201ENSMUST00000222260 483 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.8□□□□□ -0.2
Hoxd8P23463 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxd8P23463 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.8□□□□□ -0.2
Hoxd8P23463 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm15370-201ENSMUST00000117158 253 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm17208-201ENSMUST00000168388 535 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm6458-201ENSMUST00000211573 635 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm24526-201ENSMUST00000082921 158 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.79□□□□□ -0.2
Hoxd8P23463 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxd8P23463 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxd8P23463 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Mir7070-201ENSMUST00000183657 86 ntBASIC13.78□□□□□ -0.2
Hoxd8P23463 Gm37489-201ENSMUST00000191883 159 ntBASIC13.78□□□□□ -0.2
Hoxd8P23463 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.78□□□□□ -0.2
Hoxd8P23463 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.78□□□□□ -0.2
Hoxd8P23463 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxd8P23463 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxd8P23463 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms