Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prim1P20664 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.09■□□□□ 0.33
Prim1P20664 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.09■□□□□ 0.33
Prim1P20664 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.09■□□□□ 0.33
Prim1P20664 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prim1P20664 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Prim1P20664 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prim1P20664 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.08■□□□□ 0.32
Prim1P20664 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Prim1P20664 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Gm27572-201ENSMUST00000183702 255 ntBASIC17.08■□□□□ 0.32
Prim1P20664 Gm5370-201ENSMUST00000187187 574 ntBASIC17.08■□□□□ 0.32
Prim1P20664 Gm17917-201ENSMUST00000218561 953 ntBASIC17.08■□□□□ 0.32
Prim1P20664 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.08■□□□□ 0.32
Prim1P20664 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Gm9823-201ENSMUST00000051212 327 ntBASIC17.08■□□□□ 0.32
Prim1P20664 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.08■□□□□ 0.32
Prim1P20664 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prim1P20664 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prim1P20664 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.07■□□□□ 0.32
Prim1P20664 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC17.07■□□□□ 0.32
Prim1P20664 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Prim1P20664 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.07■□□□□ 0.32
Prim1P20664 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Prim1P20664 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Gm45166-201ENSMUST00000209073 683 ntBASIC17.07■□□□□ 0.32
Prim1P20664 Gm45331-201ENSMUST00000209868 554 ntBASIC17.07■□□□□ 0.32
Prim1P20664 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.07■□□□□ 0.32
Prim1P20664 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.07■□□□□ 0.32
Prim1P20664 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Prim1P20664 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Gm10268-201ENSMUST00000085340 555 ntBASIC17.07■□□□□ 0.32
Prim1P20664 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Prim1P20664 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.07■□□□□ 0.32
Prim1P20664 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prim1P20664 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.06■□□□□ 0.32
Prim1P20664 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.06■□□□□ 0.32
Prim1P20664 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.06■□□□□ 0.32
Prim1P20664 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Prim1P20664 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.06■□□□□ 0.32
Prim1P20664 Gm29013-201ENSMUST00000187431 237 ntBASIC17.06■□□□□ 0.32
Prim1P20664 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.06■□□□□ 0.32
Prim1P20664 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.06■□□□□ 0.32
Prim1P20664 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prim1P20664 Gm19309-201ENSMUST00000218295 205 ntBASIC17.06■□□□□ 0.32
Prim1P20664 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.06■□□□□ 0.32
Prim1P20664 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms