Protein–RNA interactions for Protein: P09235

Ifna9, Interferon alpha-9, mousemouse

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna9P09235 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.47□□□□□ -0.57
Ifna9P09235 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ifna9P09235 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.47□□□□□ -0.57
Ifna9P09235 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.47□□□□□ -0.57
Ifna9P09235 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ifna9P09235 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22065-201ENSMUST00000103753 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22066-201ENSMUST00000103761 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24932-201ENSMUST00000103763 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24115-201ENSMUST00000103799 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22190-201ENSMUST00000103827 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22191-201ENSMUST00000103831 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24721-201ENSMUST00000103849 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24543-201ENSMUST00000103867 82 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm28018-201ENSMUST00000103869 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm26399-201ENSMUST00000103937 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.46□□□□□ -0.57
Ifna9P09235 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25349-201ENSMUST00000177728 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm23616-201ENSMUST00000177797 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25871-201ENSMUST00000177816 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24752-201ENSMUST00000178240 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24496-201ENSMUST00000178287 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25649-201ENSMUST00000178476 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25548-201ENSMUST00000178681 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm23147-201ENSMUST00000178841 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm26095-201ENSMUST00000179270 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22171-201ENSMUST00000179283 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm23936-201ENSMUST00000179354 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm22619-201ENSMUST00000179516 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25255-201ENSMUST00000179579 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24755-201ENSMUST00000179691 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm26506-201ENSMUST00000179692 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm25086-201ENSMUST00000179931 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm23243-201ENSMUST00000180047 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24659-201ENSMUST00000180212 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm24169-201ENSMUST00000180244 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm23689-201ENSMUST00000180354 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm27359-201ENSMUST00000184153 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm27785-201ENSMUST00000184268 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm27466-201ENSMUST00000184396 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm27703-201ENSMUST00000184836 110 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gm5425-201ENSMUST00000214125 459 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.46□□□□□ -0.57
Ifna9P09235 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ifna9P09235 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.46□□□□□ -0.57
Ifna9P09235 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ifna9P09235 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ifna9P09235 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ifna9P09235 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.45□□□□□ -0.58
Ifna9P09235 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.45□□□□□ -0.58
Ifna9P09235 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ifna9P09235 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms