Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P01852 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.3□□□□□ -0.44
P01852 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
P01852 Gm27701-201ENSMUST00000184498 110 ntBASIC12.3□□□□□ -0.44
P01852 Gm9908-201ENSMUST00000211534 448 ntBASIC12.3□□□□□ -0.44
P01852 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Gm5161-201ENSMUST00000075243 853 ntBASIC12.3□□□□□ -0.44
P01852 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Gm24447-201ENSMUST00000083977 338 ntBASIC12.3□□□□□ -0.44
P01852 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.3□□□□□ -0.44
P01852 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.3□□□□□ -0.44
P01852 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.3□□□□□ -0.44
P01852 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.29□□□□□ -0.44
P01852 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.29□□□□□ -0.44
P01852 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.29□□□□□ -0.44
P01852 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.29□□□□□ -0.44
P01852 Gm11424-201ENSMUST00000121929 829 ntBASIC12.29□□□□□ -0.44
P01852 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P01852 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.29□□□□□ -0.44
P01852 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P01852 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.29□□□□□ -0.44
P01852 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.29□□□□□ -0.44
P01852 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.29□□□□□ -0.44
P01852 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.29□□□□□ -0.44
P01852 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P01852 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P01852 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P01852 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01852 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P01852 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P01852 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Gm11918-201ENSMUST00000121660 179 ntBASIC12.28□□□□□ -0.44
P01852 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.28□□□□□ -0.44
P01852 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.28□□□□□ -0.44
P01852 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.28□□□□□ -0.44
P01852 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P01852 Gm17330-201ENSMUST00000221047 165 ntBASIC12.28□□□□□ -0.44
P01852 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
P01852 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P01852 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.28□□□□□ -0.44
P01852 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01852 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms