Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
TcraP01849 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
TcraP01849 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TcraP01849 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TcraP01849 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
TcraP01849 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.81□□□□□ -0.84
TcraP01849 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TcraP01849 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TcraP01849 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
TcraP01849 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.8□□□□□ -0.84
TcraP01849 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.8□□□□□ -0.84
TcraP01849 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Gm14140-201ENSMUST00000119999 995 ntBASIC9.8□□□□□ -0.84
TcraP01849 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.8□□□□□ -0.84
TcraP01849 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.8□□□□□ -0.84
TcraP01849 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.8□□□□□ -0.84
TcraP01849 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Thap2-203ENSMUST00000218989 527 ntBASIC9.8□□□□□ -0.84
TcraP01849 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.8□□□□□ -0.84
TcraP01849 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.8□□□□□ -0.84
TcraP01849 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
TcraP01849 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.8□□□□□ -0.84
TcraP01849 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TcraP01849 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.79□□□□□ -0.84
TcraP01849 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
TcraP01849 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
TcraP01849 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TcraP01849 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.79□□□□□ -0.84
TcraP01849 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TcraP01849 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TcraP01849 Gm2445-201ENSMUST00000182798 989 ntBASIC9.79□□□□□ -0.84
TcraP01849 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.79□□□□□ -0.84
TcraP01849 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
TcraP01849 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TcraP01849 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.79□□□□□ -0.84
TcraP01849 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms