Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.48□□□□□ -0.09
Vti1aO89116 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.48□□□□□ -0.09
Vti1aO89116 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.48□□□□□ -0.09
Vti1aO89116 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Vti1aO89116 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Vti1aO89116 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1aO89116 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Gm13612-201ENSMUST00000119276 390 ntBASIC14.47□□□□□ -0.09
Vti1aO89116 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1aO89116 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.47□□□□□ -0.09
Vti1aO89116 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Vti1aO89116 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.47□□□□□ -0.09
Vti1aO89116 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vti1aO89116 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vti1aO89116 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vti1aO89116 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.46□□□□□ -0.09
Vti1aO89116 Gm24644-201ENSMUST00000157114 139 ntBASIC14.46□□□□□ -0.09
Vti1aO89116 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Gm27572-201ENSMUST00000183702 255 ntBASIC14.46□□□□□ -0.09
Vti1aO89116 Gm43818-201ENSMUST00000200605 466 ntBASIC14.46□□□□□ -0.09
Vti1aO89116 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.46□□□□□ -0.09
Vti1aO89116 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vti1aO89116 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms