Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.89□□□□□ -0.35
Hcn1O88704 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.89□□□□□ -0.35
Hcn1O88704 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Gm21854-201ENSMUST00000179901 471 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hcn1O88704 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hcn1O88704 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Hcn1O88704 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.89□□□□□ -0.35
Hcn1O88704 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.89□□□□□ -0.35
Hcn1O88704 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hcn1O88704 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Hcn1O88704 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Hcn1O88704 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hcn1O88704 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm6218-201ENSMUST00000219812 628 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.88□□□□□ -0.35
Hcn1O88704 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hcn1O88704 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hcn1O88704 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.88□□□□□ -0.35
Hcn1O88704 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hcn1O88704 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hcn1O88704 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.87□□□□□ -0.35
Hcn1O88704 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.87□□□□□ -0.35
Hcn1O88704 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hcn1O88704 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.87□□□□□ -0.35
Hcn1O88704 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hcn1O88704 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.87□□□□□ -0.35
Hcn1O88704 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hcn1O88704 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms