Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vti1bO88384 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Vti1bO88384 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vti1bO88384 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.83□□□□□ -0.36
Vti1bO88384 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Vti1bO88384 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.83□□□□□ -0.36
Vti1bO88384 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.83□□□□□ -0.36
Vti1bO88384 Gm7775-201ENSMUST00000218871 853 ntBASIC12.83□□□□□ -0.36
Vti1bO88384 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.83□□□□□ -0.36
Vti1bO88384 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.83□□□□□ -0.36
Vti1bO88384 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.83□□□□□ -0.36
Vti1bO88384 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.83□□□□□ -0.36
Vti1bO88384 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vti1bO88384 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Vti1bO88384 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.82□□□□□ -0.36
Vti1bO88384 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vti1bO88384 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Gm15460-201ENSMUST00000118147 391 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.82□□□□□ -0.36
Vti1bO88384 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vti1bO88384 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vti1bO88384 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Gm3436-201ENSMUST00000179930 840 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Gm43703-201ENSMUST00000200523 763 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vti1bO88384 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vti1bO88384 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vti1bO88384 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.82□□□□□ -0.36
Vti1bO88384 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vti1bO88384 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vti1bO88384 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1bO88384 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1bO88384 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vti1bO88384 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1bO88384 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1bO88384 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.81□□□□□ -0.36
Vti1bO88384 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.81□□□□□ -0.36
Vti1bO88384 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.81□□□□□ -0.36
Vti1bO88384 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vti1bO88384 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vti1bO88384 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms