Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
BckdkO55028 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.48□□□□□ -0.41
BckdkO55028 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.48□□□□□ -0.41
BckdkO55028 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.48□□□□□ -0.41
BckdkO55028 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.48□□□□□ -0.41
BckdkO55028 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BckdkO55028 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BckdkO55028 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
BckdkO55028 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.47□□□□□ -0.41
BckdkO55028 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.47□□□□□ -0.41
BckdkO55028 Gm12138-201ENSMUST00000122180 951 ntBASIC12.47□□□□□ -0.41
BckdkO55028 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.47□□□□□ -0.41
BckdkO55028 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.47□□□□□ -0.41
BckdkO55028 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.47□□□□□ -0.41
BckdkO55028 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.47□□□□□ -0.41
BckdkO55028 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.47□□□□□ -0.41
BckdkO55028 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
BckdkO55028 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BckdkO55028 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.47□□□□□ -0.41
BckdkO55028 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
BckdkO55028 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BckdkO55028 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Gm6912-201ENSMUST00000117218 544 ntBASIC12.46□□□□□ -0.41
BckdkO55028 Gm12341-201ENSMUST00000119724 503 ntBASIC12.46□□□□□ -0.41
BckdkO55028 Gm15806-201ENSMUST00000120696 955 ntBASIC12.46□□□□□ -0.41
BckdkO55028 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Gm9002-201ENSMUST00000178437 499 ntBASIC12.46□□□□□ -0.41
BckdkO55028 Gm2445-201ENSMUST00000182798 989 ntBASIC12.46□□□□□ -0.41
BckdkO55028 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.46□□□□□ -0.41
BckdkO55028 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.46□□□□□ -0.41
BckdkO55028 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
BckdkO55028 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BckdkO55028 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BckdkO55028 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
BckdkO55028 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
BckdkO55028 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
BckdkO55028 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BckdkO55028 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
BckdkO55028 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
BckdkO55028 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms