Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Lsm2O35900 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.95□□□□□ -0.5
Lsm2O35900 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Gm9719-201ENSMUST00000162765 543 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lsm2O35900 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.95□□□□□ -0.5
Lsm2O35900 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm2O35900 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm2O35900 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lsm2O35900 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm2O35900 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm2O35900 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm2O35900 Gm13385-201ENSMUST00000121089 220 ntBASIC11.94□□□□□ -0.5
Lsm2O35900 Mir8117-201ENSMUST00000184773 107 ntBASIC11.94□□□□□ -0.5
Lsm2O35900 Gm16476-201ENSMUST00000221544 139 ntBASIC11.94□□□□□ -0.5
Lsm2O35900 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Lsm2O35900 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.94□□□□□ -0.5
Lsm2O35900 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm2O35900 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Lsm2O35900 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm2O35900 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm2O35900 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.93□□□□□ -0.5
Lsm2O35900 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lsm2O35900 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.93□□□□□ -0.5
Lsm2O35900 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.93□□□□□ -0.5
Lsm2O35900 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.93□□□□□ -0.5
Lsm2O35900 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.93□□□□□ -0.5
Lsm2O35900 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm2O35900 Gm18766-201ENSMUST00000189811 808 ntBASIC11.93□□□□□ -0.5
Lsm2O35900 Gm29541-201ENSMUST00000191351 678 ntBASIC11.93□□□□□ -0.5
Lsm2O35900 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm2O35900 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.93□□□□□ -0.5
Lsm2O35900 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms