Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Gm15678-201ENSMUST00000117573 960 ntBASIC12.2□□□□□ -0.46
Matn3O35701 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.2□□□□□ -0.46
Matn3O35701 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.2□□□□□ -0.46
Matn3O35701 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Matn3O35701 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Matn3O35701 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.19□□□□□ -0.46
Matn3O35701 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.19□□□□□ -0.46
Matn3O35701 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.19□□□□□ -0.46
Matn3O35701 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Matn3O35701 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Matn3O35701 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Matn3O35701 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.19□□□□□ -0.46
Matn3O35701 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Matn3O35701 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Matn3O35701 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.18□□□□□ -0.46
Matn3O35701 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.18□□□□□ -0.46
Matn3O35701 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.18□□□□□ -0.46
Matn3O35701 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Matn3O35701 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Matn3O35701 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Matn3O35701 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.18□□□□□ -0.46
Matn3O35701 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms