Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Polr1aO35134 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Gm43134-201ENSMUST00000199434 1886 ntBASIC20.27■□□□□ 0.83
Polr1aO35134 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Polr1aO35134 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Gm24845-201ENSMUST00000158034 109 ntBASIC20.26■□□□□ 0.83
Polr1aO35134 Gm26361-201ENSMUST00000158868 186 ntBASIC20.26■□□□□ 0.83
Polr1aO35134 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC20.26■□□□□ 0.83
Polr1aO35134 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Polr1aO35134 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC20.26■□□□□ 0.83
Polr1aO35134 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Gm43908-201ENSMUST00000205074 1472 ntBASIC20.25■□□□□ 0.83
Polr1aO35134 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
Polr1aO35134 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 Gm12566-201ENSMUST00000121479 359 ntBASIC20.25■□□□□ 0.83
Polr1aO35134 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC20.25■□□□□ 0.83
Polr1aO35134 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC20.25■□□□□ 0.83
Polr1aO35134 AC108416.1-202ENSMUST00000228927 1201 ntBASIC20.25■□□□□ 0.83
Polr1aO35134 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Polr1aO35134 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Polr1aO35134 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Rprl1-202ENSMUST00000198476 238 ntBASIC20.24■□□□□ 0.83
Polr1aO35134 Gm8913-201ENSMUST00000209491 641 ntBASIC20.24■□□□□ 0.83
Polr1aO35134 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Polr1aO35134 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Polr1aO35134 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Polr1aO35134 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC20.24■□□□□ 0.83
Polr1aO35134 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 AC131330.1-201ENSMUST00000227814 1015 ntBASIC20.24■□□□□ 0.83
Polr1aO35134 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Polr1aO35134 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Polr1aO35134 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 AC126444.1-201ENSMUST00000225938 1768 ntBASIC20.23■□□□□ 0.83
Polr1aO35134 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 Gm28450-201ENSMUST00000187349 638 ntBASIC20.23■□□□□ 0.83
Polr1aO35134 Gm44094-201ENSMUST00000204703 2030 ntBASIC20.23■□□□□ 0.83
Polr1aO35134 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.23■□□□□ 0.83
Polr1aO35134 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Polr1aO35134 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Polr1aO35134 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms