Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm37259-201ENSMUST00000193903 849 ntBASIC16.52■□□□□ 0.24
Dctn1O08788 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dctn1O08788 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.52■□□□□ 0.24
Dctn1O08788 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dctn1O08788 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Dctn1O08788 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dctn1O08788 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dctn1O08788 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Dctn1O08788 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dctn1O08788 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dctn1O08788 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Dctn1O08788 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Dctn1O08788 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dctn1O08788 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Dctn1O08788 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dctn1O08788 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Dctn1O08788 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dctn1O08788 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Gm16479-201ENSMUST00000121706 932 ntBASIC16.51■□□□□ 0.23
Dctn1O08788 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.51■□□□□ 0.23
Dctn1O08788 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.51■□□□□ 0.23
Dctn1O08788 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.51■□□□□ 0.23
Dctn1O08788 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.51■□□□□ 0.23
Dctn1O08788 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Dctn1O08788 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dctn1O08788 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.5■□□□□ 0.23
Dctn1O08788 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Dctn1O08788 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Gm22323-201ENSMUST00000103832 109 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Gm7809-201ENSMUST00000153199 742 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Gm2991-201ENSMUST00000173338 480 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Mir3102-201ENSMUST00000175555 104 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Gm6621-201ENSMUST00000193251 772 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.5■□□□□ 0.23
Dctn1O08788 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.5■□□□□ 0.23
Dctn1O08788 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Dctn1O08788 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.5■□□□□ 0.23
Dctn1O08788 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dctn1O08788 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Dctn1O08788 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Dctn1O08788 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.49■□□□□ 0.23
Dctn1O08788 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.49■□□□□ 0.23
Dctn1O08788 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.49■□□□□ 0.23
Dctn1O08788 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 Gm26083-201ENSMUST00000157904 193 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.49■□□□□ 0.23
Dctn1O08788 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.49■□□□□ 0.23
Dctn1O08788 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dctn1O08788 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Dctn1O08788 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
Dctn1O08788 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms