Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm28760-201ENSMUST00000185995 736 ntBASIC12.01□□□□□ -0.49
Raet1cO08604 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.01□□□□□ -0.49
Raet1cO08604 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm5279-201ENSMUST00000199575 745 ntBASIC12.01□□□□□ -0.49
Raet1cO08604 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.01□□□□□ -0.49
Raet1cO08604 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Raet1cO08604 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Raet1cO08604 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.01□□□□□ -0.49
Raet1cO08604 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.01□□□□□ -0.49
Raet1cO08604 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Raet1cO08604 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Raet1cO08604 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Raet1cO08604 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Raet1cO08604 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Gm22189-201ENSMUST00000103822 86 ntBASIC12□□□□□ -0.49
Raet1cO08604 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12□□□□□ -0.49
Raet1cO08604 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Gm16215-201ENSMUST00000161990 637 ntBASIC12□□□□□ -0.49
Raet1cO08604 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12□□□□□ -0.49
Raet1cO08604 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Gm3365-201ENSMUST00000216296 1480 ntBASIC12□□□□□ -0.49
Raet1cO08604 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Raet1cO08604 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Raet1cO08604 Gm28386-201ENSMUST00000189147 1849 ntBASIC12□□□□□ -0.49
Raet1cO08604 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Raet1cO08604 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Raet1cO08604 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raet1cO08604 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.99□□□□□ -0.49
Raet1cO08604 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Raet1cO08604 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raet1cO08604 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Gm12485-201ENSMUST00000119641 291 ntBASIC11.99□□□□□ -0.49
Raet1cO08604 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.99□□□□□ -0.49
Raet1cO08604 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.99□□□□□ -0.49
Raet1cO08604 Gm43094-201ENSMUST00000196549 921 ntBASIC11.99□□□□□ -0.49
Raet1cO08604 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raet1cO08604 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms