Protein–RNA interactions for Protein: O08545

Efna3, Ephrin-A3, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efna3O08545 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.52□□□□□ -0.41
Efna3O08545 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.52□□□□□ -0.41
Efna3O08545 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efna3O08545 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Efna3O08545 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Efna3O08545 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efna3O08545 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efna3O08545 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.51□□□□□ -0.41
Efna3O08545 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.51□□□□□ -0.41
Efna3O08545 Gm28631-201ENSMUST00000190740 334 ntBASIC12.51□□□□□ -0.41
Efna3O08545 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Gm37917-201ENSMUST00000194711 392 ntBASIC12.51□□□□□ -0.41
Efna3O08545 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.51□□□□□ -0.41
Efna3O08545 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.51□□□□□ -0.41
Efna3O08545 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.51□□□□□ -0.41
Efna3O08545 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Efna3O08545 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.51□□□□□ -0.41
Efna3O08545 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Efna3O08545 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efna3O08545 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.51□□□□□ -0.41
Efna3O08545 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.51□□□□□ -0.41
Efna3O08545 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efna3O08545 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efna3O08545 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Efna3O08545 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Gm12585-201ENSMUST00000117307 290 ntBASIC12.5□□□□□ -0.41
Efna3O08545 Gm14127-201ENSMUST00000117906 678 ntBASIC12.5□□□□□ -0.41
Efna3O08545 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Efna3O08545 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.5□□□□□ -0.41
Efna3O08545 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Efna3O08545 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.5□□□□□ -0.41
Efna3O08545 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.5□□□□□ -0.41
Efna3O08545 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.5□□□□□ -0.41
Efna3O08545 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Efna3O08545 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.5□□□□□ -0.41
Efna3O08545 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efna3O08545 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Efna3O08545 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Efna3O08545 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Efna3O08545 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efna3O08545 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms