Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm18766-201ENSMUST00000189811 808 ntBASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm29541-201ENSMUST00000191351 678 ntBASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm18049-201ENSMUST00000208909 581 ntBASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Dupd1-202ENSMUST00000224735 548 ntBASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shisa8J3QNX5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.23□□□□□ -0.45
Shisa8J3QNX5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.23□□□□□ -0.45
Shisa8J3QNX5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.22□□□□□ -0.45
Shisa8J3QNX5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm12428-201ENSMUST00000119844 727 ntBASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm9719-201ENSMUST00000162765 543 ntBASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm10175-201ENSMUST00000086013 645 ntBASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa8J3QNX5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms