Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.77□□□□□ -0.2
Trim55G3X8Y1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim55G3X8Y1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim55G3X8Y1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim55G3X8Y1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim55G3X8Y1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm8097-201ENSMUST00000117903 829 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim55G3X8Y1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim55G3X8Y1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim55G3X8Y1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms