Protein–RNA interactions for Protein: F8VPU2

Farp1, FERM, ARHGEF and pleckstrin domain-containing protein 1, mousemouse

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Farp1F8VPU2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Farp1F8VPU2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Farp1F8VPU2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Farp1F8VPU2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Farp1F8VPU2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Farp1F8VPU2 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gm24447-201ENSMUST00000083977 338 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.33□□□□□ -0.12
Farp1F8VPU2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Farp1F8VPU2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm14301-201ENSMUST00000120181 324 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm17330-201ENSMUST00000221047 165 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm5161-201ENSMUST00000075243 853 ntBASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Farp1F8VPU2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Farp1F8VPU2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Farp1F8VPU2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms