Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Gm44069-201ENSMUST00000204898 506 ntBASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb9E9Q5G2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhb9E9Q5G2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Acot6-202ENSMUST00000222921 3622 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm14127-201ENSMUST00000117906 678 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm12203-201ENSMUST00000118235 598 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm12209-201ENSMUST00000120089 596 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm27331-201ENSMUST00000183705 60 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb9E9Q5G2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Gm16372-201ENSMUST00000073088 450 ntBASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdhb9E9Q5G2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms