Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm43703-201ENSMUST00000200523 763 ntBASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm45394-201ENSMUST00000209240 1175 ntBASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm5878E9PUB3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm45841-201ENSMUST00000207700 164 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm5878E9PUB3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms