Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gm18307-201ENSMUST00000206864 949 ntBASIC12.18□□□□□ -0.46
Gm3543D3Z235 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.18□□□□□ -0.46
Gm3543D3Z235 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm3543D3Z235 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.17□□□□□ -0.46
Gm3543D3Z235 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Mir698-201ENSMUST00000102164 109 ntBASIC12.17□□□□□ -0.46
Gm3543D3Z235 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm3543D3Z235 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm3543D3Z235 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.16□□□□□ -0.46
Gm3543D3Z235 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm3543D3Z235 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms