Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.69■□□□□ 0.1
Usp42B2RQC2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.69■□□□□ 0.1
Usp42B2RQC2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp42B2RQC2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm13612-201ENSMUST00000119276 390 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm7653-201ENSMUST00000214567 508 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Gm8598-201ENSMUST00000221184 836 ntBASIC15.68■□□□□ 0.1
Usp42B2RQC2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp42B2RQC2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Usp42B2RQC2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms