Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.9□□□□□ -0.02
Brpf3B2KF05 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm13385-201ENSMUST00000121089 220 ntBASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm12260-201ENSMUST00000122447 411 ntBASIC14.89□□□□□ -0.03
Brpf3B2KF05 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.89□□□□□ -0.03
Brpf3B2KF05 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm10175-201ENSMUST00000086013 645 ntBASIC14.89□□□□□ -0.03
Brpf3B2KF05 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brpf3B2KF05 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.88□□□□□ -0.03
Brpf3B2KF05 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Rprl2-201ENSMUST00000157150 290 ntBASIC14.88□□□□□ -0.03
Brpf3B2KF05 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Gm45841-201ENSMUST00000207700 164 ntBASIC14.88□□□□□ -0.03
Brpf3B2KF05 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.88□□□□□ -0.03
Brpf3B2KF05 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brpf3B2KF05 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms