Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm12887B1AVM1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Mir125a-201ENSMUST00000083545 68 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm12887B1AVM1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Gm12887B1AVM1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm18737-201ENSMUST00000173594 937 ntBASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm5364-201ENSMUST00000216789 889 ntBASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm12887B1AVM1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms