Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm14219-201ENSMUST00000120414 288 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm40879-201ENSMUST00000220759 612 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd6A3KFM7 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm12380-201ENSMUST00000119012 544 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm11941-201ENSMUST00000119904 610 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm8738-201ENSMUST00000172606 329 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm17208-201ENSMUST00000168388 535 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.75□□□□□ -0.69
Chd6A3KFM7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd6A3KFM7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm26185-201ENSMUST00000157692 266 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.74□□□□□ -0.69
Chd6A3KFM7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd6A3KFM7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms