Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Gm5989-201ENSMUST00000096092 2077 ntBASIC14□□□□□ -0.17
Scn1aA2APX8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn1aA2APX8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn1aA2APX8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14□□□□□ -0.17
Scn1aA2APX8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Scn1aA2APX8 AC140451.2-201ENSMUST00000228030 664 ntBASIC14□□□□□ -0.17
Scn1aA2APX8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn1aA2APX8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn1aA2APX8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm1335-201ENSMUST00000121653 386 ntBASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Gm19184-201ENSMUST00000196798 928 ntBASIC13.99□□□□□ -0.17
Scn1aA2APX8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.99□□□□□ -0.17
Scn1aA2APX8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Grk6-205ENSMUST00000224653 2976 ntBASIC13.99□□□□□ -0.17
Scn1aA2APX8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Scn1aA2APX8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm37042-201ENSMUST00000193816 581 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm43133-201ENSMUST00000197472 463 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm9823-201ENSMUST00000051212 327 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Gm10478-201ENSMUST00000084451 396 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1aA2APX8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.98□□□□□ -0.17
Scn1aA2APX8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1aA2APX8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1aA2APX8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1aA2APX8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn1aA2APX8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms