Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm10766-202ENSMUST00000194123 606 ntBASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav12d-1A0N8R0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm15393-201ENSMUST00000120499 219 ntBASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav12d-1A0N8R0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Mir1897-201ENSMUST00000122581 272 ntBASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm24158-201ENSMUST00000175263 71 ntBASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm45841-201ENSMUST00000207700 164 ntBASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav12d-1A0N8R0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms