Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.03□□□□□ -0.64
Trav18A0A075B656 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav18A0A075B656 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav18A0A075B656 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm14701-201ENSMUST00000117156 348 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm6912-201ENSMUST00000117218 544 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm12585-201ENSMUST00000117307 290 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm26308-201ENSMUST00000157768 69 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm22175-201ENSMUST00000175007 78 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm27430-201ENSMUST00000184585 107 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gm44333-201ENSMUST00000197168 107 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.02□□□□□ -0.65
Trav18A0A075B656 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav18A0A075B656 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm23935-201ENSMUST00000102303 57 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Gm24270-201ENSMUST00000102326 57 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav18A0A075B656 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.01□□□□□ -0.65
Trav18A0A075B656 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms