Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav8-1A0A075B641 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm7977-201ENSMUST00000193787 748 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44357-201ENSMUST00000195897 142 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm19658-201ENSMUST00000196231 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44367-201ENSMUST00000196836 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44350-201ENSMUST00000197197 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44390-201ENSMUST00000197533 144 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44313-201ENSMUST00000198018 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44486-201ENSMUST00000198508 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44314-201ENSMUST00000199263 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44394-201ENSMUST00000199558 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44484-201ENSMUST00000199873 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44466-201ENSMUST00000200264 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm44359-201ENSMUST00000200671 138 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav8-1A0A075B641 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms