Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gm5493S4R2D1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Gm5493S4R2D1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5493S4R2D1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5493S4R2D1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5493S4R2D1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.09■□□□□ 0.49
Gm5493S4R2D1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5493S4R2D1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5493S4R2D1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5493S4R2D1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Gm45855-201ENSMUST00000212546 880 ntBASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm5493S4R2D1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5493S4R2D1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.07■□□□□ 0.48
Gm5493S4R2D1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm5493S4R2D1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.06■□□□□ 0.48
Gm5493S4R2D1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm5493S4R2D1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm5493S4R2D1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5493S4R2D1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5493S4R2D1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5493S4R2D1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5493S4R2D1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.04■□□□□ 0.48
Gm5493S4R2D1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gm5493S4R2D1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm5493S4R2D1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Gm22567-201ENSMUST00000175542 342 ntBASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm5493S4R2D1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm5493S4R2D1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5493S4R2D1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5493S4R2D1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5493S4R2D1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Gm5493S4R2D1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5493S4R2D1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm5493S4R2D1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm5493S4R2D1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Gm5493S4R2D1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm5493S4R2D1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm5493S4R2D1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5493S4R2D1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms