Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
H2afb3S4R1G7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb3S4R1G7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb3S4R1G7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb3S4R1G7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb3S4R1G7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb3S4R1G7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb3S4R1G7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb3S4R1G7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb3S4R1G7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb3S4R1G7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.13■□□□□ 0.65
H2afb3S4R1G7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb3S4R1G7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb3S4R1G7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms