Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Smarcb1Q9Z0H3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Smarcb1Q9Z0H3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Smarcb1Q9Z0H3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Smarcb1Q9Z0H3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.4■■□□□ 1.18
Smarcb1Q9Z0H3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Smarcb1Q9Z0H3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Smarcb1Q9Z0H3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Smarcb1Q9Z0H3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smarcb1Q9Z0H3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smarcb1Q9Z0H3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smarcb1Q9Z0H3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Smarcb1Q9Z0H3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smarcb1Q9Z0H3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Smarcb1Q9Z0H3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.37■■□□□ 1.17
Smarcb1Q9Z0H3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smarcb1Q9Z0H3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smarcb1Q9Z0H3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Smarcb1Q9Z0H3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smarcb1Q9Z0H3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smarcb1Q9Z0H3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smarcb1Q9Z0H3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Smarcb1Q9Z0H3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.34■■□□□ 1.17
Smarcb1Q9Z0H3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smarcb1Q9Z0H3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smarcb1Q9Z0H3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.33■■□□□ 1.17
Smarcb1Q9Z0H3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smarcb1Q9Z0H3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smarcb1Q9Z0H3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smarcb1Q9Z0H3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smarcb1Q9Z0H3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smarcb1Q9Z0H3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Smarcb1Q9Z0H3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Smarcb1Q9Z0H3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smarcb1Q9Z0H3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.26■■□□□ 1.15
Smarcb1Q9Z0H3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smarcb1Q9Z0H3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Smarcb1Q9Z0H3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smarcb1Q9Z0H3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms