Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cldn3Q9Z0G9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cldn3Q9Z0G9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn3Q9Z0G9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn3Q9Z0G9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cldn3Q9Z0G9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn3Q9Z0G9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn3Q9Z0G9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn3Q9Z0G9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn3Q9Z0G9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn3Q9Z0G9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cldn3Q9Z0G9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cldn3Q9Z0G9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cldn3Q9Z0G9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cldn3Q9Z0G9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.64■■□□□ 1.05
Cldn3Q9Z0G9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cldn3Q9Z0G9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cldn3Q9Z0G9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cldn3Q9Z0G9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cldn3Q9Z0G9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn3Q9Z0G9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn3Q9Z0G9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cldn3Q9Z0G9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.59■■□□□ 1.05
Cldn3Q9Z0G9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.59■■□□□ 1.05
Cldn3Q9Z0G9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.59■■□□□ 1.05
Cldn3Q9Z0G9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cldn3Q9Z0G9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn3Q9Z0G9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.58■■□□□ 1.04
Cldn3Q9Z0G9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cldn3Q9Z0G9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms