Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RpgrQ9R0X5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RpgrQ9R0X5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RpgrQ9R0X5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RpgrQ9R0X5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RpgrQ9R0X5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RpgrQ9R0X5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RpgrQ9R0X5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RpgrQ9R0X5 Gm27502-201ENSMUST00000183495 199 ntBASIC21.55■■□□□ 1.04
RpgrQ9R0X5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RpgrQ9R0X5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RpgrQ9R0X5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RpgrQ9R0X5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RpgrQ9R0X5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RpgrQ9R0X5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.52■■□□□ 1.04
RpgrQ9R0X5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.52■■□□□ 1.04
RpgrQ9R0X5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RpgrQ9R0X5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RpgrQ9R0X5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RpgrQ9R0X5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RpgrQ9R0X5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RpgrQ9R0X5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RpgrQ9R0X5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RpgrQ9R0X5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RpgrQ9R0X5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RpgrQ9R0X5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RpgrQ9R0X5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RpgrQ9R0X5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RpgrQ9R0X5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.49■■□□□ 1.03
RpgrQ9R0X5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RpgrQ9R0X5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Cap2-205ENSMUST00000225824 1634 ntBASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RpgrQ9R0X5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RpgrQ9R0X5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RpgrQ9R0X5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RpgrQ9R0X5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RpgrQ9R0X5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RpgrQ9R0X5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RpgrQ9R0X5 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.46■■□□□ 1.03
RpgrQ9R0X5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RpgrQ9R0X5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RpgrQ9R0X5 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RpgrQ9R0X5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Gm10420-201ENSMUST00000121713 882 ntBASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RpgrQ9R0X5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms