Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shroom3Q9QXN0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Shroom3Q9QXN0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.67■■□□□ 1.06
Shroom3Q9QXN0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shroom3Q9QXN0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.67■■□□□ 1.06
Shroom3Q9QXN0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.67■■□□□ 1.06
Shroom3Q9QXN0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shroom3Q9QXN0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shroom3Q9QXN0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shroom3Q9QXN0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Rps24-207ENSMUST00000224568 714 ntBASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shroom3Q9QXN0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shroom3Q9QXN0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom3Q9QXN0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom3Q9QXN0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom3Q9QXN0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shroom3Q9QXN0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom3Q9QXN0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom3Q9QXN0 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.61■■□□□ 1.05
Shroom3Q9QXN0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom3Q9QXN0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shroom3Q9QXN0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Shroom3Q9QXN0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shroom3Q9QXN0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Shroom3Q9QXN0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shroom3Q9QXN0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Shroom3Q9QXN0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Shroom3Q9QXN0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom3Q9QXN0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom3Q9QXN0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shroom3Q9QXN0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.57■■□□□ 1.04
Shroom3Q9QXN0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Gm45102-201ENSMUST00000207427 857 ntBASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.56■■□□□ 1.04
Shroom3Q9QXN0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Shroom3Q9QXN0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.55■■□□□ 1.04
Shroom3Q9QXN0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom3Q9QXN0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shroom3Q9QXN0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Shroom3Q9QXN0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom3Q9QXN0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Shroom3Q9QXN0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shroom3Q9QXN0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms