Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sec61a2Q9JLR1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec61a2Q9JLR1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec61a2Q9JLR1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec61a2Q9JLR1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec61a2Q9JLR1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sec61a2Q9JLR1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sec61a2Q9JLR1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sec61a2Q9JLR1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a2Q9JLR1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a2Q9JLR1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.15■□□□□ 0.66
Sec61a2Q9JLR1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a2Q9JLR1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sec61a2Q9JLR1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sec61a2Q9JLR1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a2Q9JLR1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a2Q9JLR1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a2Q9JLR1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a2Q9JLR1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a2Q9JLR1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a2Q9JLR1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.11■□□□□ 0.65
Sec61a2Q9JLR1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a2Q9JLR1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a2Q9JLR1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms