Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.08■□□□□ 0.97
Lima1Q9ERG0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lima1Q9ERG0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lima1Q9ERG0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lima1Q9ERG0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lima1Q9ERG0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lima1Q9ERG0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Lima1Q9ERG0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.07■□□□□ 0.96
Lima1Q9ERG0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lima1Q9ERG0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lima1Q9ERG0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
Lima1Q9ERG0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.07■□□□□ 0.96
Lima1Q9ERG0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lima1Q9ERG0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lima1Q9ERG0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lima1Q9ERG0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lima1Q9ERG0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lima1Q9ERG0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lima1Q9ERG0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lima1Q9ERG0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Lima1Q9ERG0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lima1Q9ERG0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.02■□□□□ 0.96
Lima1Q9ERG0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lima1Q9ERG0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lima1Q9ERG0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lima1Q9ERG0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lima1Q9ERG0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lima1Q9ERG0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lima1Q9ERG0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lima1Q9ERG0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lima1Q9ERG0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lima1Q9ERG0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lima1Q9ERG0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.97■□□□□ 0.95
Lima1Q9ERG0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lima1Q9ERG0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lima1Q9ERG0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lima1Q9ERG0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.96■□□□□ 0.95
Lima1Q9ERG0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms