Protein–RNA interactions for Protein: Q9EPL5

Mmp1a, Interstitial collagenase A, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1aQ9EPL5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp1aQ9EPL5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.63■□□□□ 0.89
Mmp1aQ9EPL5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1aQ9EPL5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.62■□□□□ 0.89
Mmp1aQ9EPL5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1aQ9EPL5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1aQ9EPL5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp1aQ9EPL5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp1aQ9EPL5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp1aQ9EPL5 Gm8495-201ENSMUST00000188740 694 ntBASIC20.6■□□□□ 0.89
Mmp1aQ9EPL5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp1aQ9EPL5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
Mmp1aQ9EPL5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1aQ9EPL5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1aQ9EPL5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1aQ9EPL5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1aQ9EPL5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1aQ9EPL5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1aQ9EPL5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1aQ9EPL5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp1aQ9EPL5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1aQ9EPL5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1aQ9EPL5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1aQ9EPL5 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1aQ9EPL5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Mmp1aQ9EPL5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1aQ9EPL5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1aQ9EPL5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1aQ9EPL5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Mmp1aQ9EPL5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp1aQ9EPL5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.51■□□□□ 0.87
Mmp1aQ9EPL5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1aQ9EPL5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1aQ9EPL5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1aQ9EPL5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms