Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp48Q9D361 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.45■■□□□ 1.02
Snrnp48Q9D361 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Snrnp48Q9D361 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Snrnp48Q9D361 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp48Q9D361 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp48Q9D361 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.42■■□□□ 1.02
Snrnp48Q9D361 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp48Q9D361 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Snrnp48Q9D361 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp48Q9D361 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp48Q9D361 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.41■■□□□ 1.02
Snrnp48Q9D361 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Snrnp48Q9D361 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Snrnp48Q9D361 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.41■■□□□ 1.02
Snrnp48Q9D361 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Snrnp48Q9D361 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp48Q9D361 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Snrnp48Q9D361 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.39■■□□□ 1.01
Snrnp48Q9D361 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Snrnp48Q9D361 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Snrnp48Q9D361 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp48Q9D361 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp48Q9D361 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp48Q9D361 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp48Q9D361 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp48Q9D361 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Snrnp48Q9D361 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp48Q9D361 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp48Q9D361 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.37■■□□□ 1.01
Snrnp48Q9D361 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp48Q9D361 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp48Q9D361 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Snrnp48Q9D361 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp48Q9D361 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp48Q9D361 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp48Q9D361 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.33■■□□□ 1.01
Snrnp48Q9D361 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.33■■□□□ 1
Snrnp48Q9D361 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.32■■□□□ 1
Snrnp48Q9D361 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.32■■□□□ 1
Snrnp48Q9D361 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.32■■□□□ 1
Snrnp48Q9D361 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp48Q9D361 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp48Q9D361 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Snrnp48Q9D361 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.31■■□□□ 1
Snrnp48Q9D361 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Snrnp48Q9D361 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.31■■□□□ 1
Snrnp48Q9D361 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp48Q9D361 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.31■■□□□ 1
Snrnp48Q9D361 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms